Welcome to Frustratometer’s documentation!

Contents:

• Frustratometer
  • Copyright
  • Acknowledgements
• Installation
  • Optional Dependencies
• AWSEM Frustratometer examples
  • Loading Protein Structures
  • Creating an AWSEM Model Instance
  • Calculating Residue Densities
  • Calculating Frustration Indices
  • Single Residue Frustration
  • Single Residue Decoy Fluctuation
  • Mutational Frustration
  • Energy Calculations
  • Fields Energy
  • Couplings Energy
  • Native Energy
• DCA Frustratometer examples
  • Loading Protein Structures
  • Creating a DCA Model Instance
  • Check the Accuracy of the Potts Model
  • Calculating Frustration Indices
  • Single Residue Frustration
  • Single Residue Decoy Fluctuation
  • Mutational Frustration
  • Energy Calculations
  • Fields Energy
  • Couplings Energy
  • Native Energy
• Frustratometer classes
  • Structure
  • AWSEM
  • DCA
  • Map
• Frustratometer Functions
  • Overview
  • Protein Database Handling
  • Protein Family Analysis
  • Sequence Alignment
  • MSA Filtering
  • Mapping Utilities
  • Direct Coupling Analysis
  • Frustration Analysis
  • Utility Functions

Indices and tables

• Index

• Module Index

• Search Page